STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09024COG0044 Dihydroorotase and related cyclic amidohydrolases. (427 aa)    
Predicted Functional Partners:
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain.
 0.999
C357_19855
COG0505 Carbamoylphosphate synthase small subunit.
  
 0.987
carB
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 0.984
C357_17098
COG0167 Dihydroorotate dehydrogenase.
  
 0.978
C357_18367
COG0167 Dihydroorotate dehydrogenase.
 
 0.978
C357_06017
COG0418 Dihydroorotase.
    
 0.908
pyrE
COG0461 Orotate phosphoribosyltransferase.
  
 
 0.888
C357_12199
COG0284 Orotidine-5'-phosphate decarboxylase.
 
  
 0.888
C357_09029
COG0344 Predicted membrane protein.
 
     0.876
C357_16873
COG2233 Xanthine/uracil permeases.
  
  
 0.852
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.