STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09149Hypothetical protein. (324 aa)    
Predicted Functional Partners:
C357_09144
COG1309 Transcriptional regulator.
       0.620
C357_05857
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
 
   
 0.532
hemH
Ferrochelatase; COG0276 Protoheme ferro-lyase (ferrochelatase).
     
 0.526
C357_15946
COG1977 Molybdopterin converting factor, small subunit.
   
 
  0.516
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
       0.475
C357_02416
COG2193 Bacterioferritin (cytochrome b1).
    
 0.417
C357_13777
Metal ABC transporter substrate-binding lipoprotein; COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin.
      
 0.408
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.