STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09189Hypothetical protein; COG0628 Predicted permease. (396 aa)    
Predicted Functional Partners:
C357_15646
F0F1 ATP synthase subunit B.
  
  
  0.686
C357_05423
Two-component response regulator; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.581
C357_09184
Exopolysaccharide synthesis ExoD; COG3932 Uncharacterized ABC-type transport system, permease components.
       0.564
C357_05433
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
     0.490
C357_15816
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
 
     0.487
C357_01600
Response regulator; COG0784 FOG: CheY-like receiver.
  
     0.470
C357_05438
Sensor histidine kinase, putative; COG3920 Signal transduction histidine kinase.
  
     0.461
C357_11849
Hypothetical protein.
 
     0.447
C357_11859
Hypothetical protein.
 
     0.401
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (20%) [HD]