STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09299COG2003 DNA repair proteins. (254 aa)    
Predicted Functional Partners:
C357_15201
Competence protein F; COG1040 Predicted amidophosphoribosyltransferases.
 
    0.965
C357_00979
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
    0.887
C357_10157
COG1792 Cell shape-determining protein.
  
  
 0.884
C357_13173
Maf protein; COG0424 Nucleotide-binding protein implicated in inhibition of septum formation.
 
  
 0.868
C357_15016
COG0424 Nucleotide-binding protein implicated in inhibition of septum formation.
  
  
 0.832
C357_18662
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
 
    0.776
C357_15281
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
   
    0.771
C357_13887
DNA processing protein DprA, putative; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
  
  
 0.742
C357_15076
COG0249 Mismatch repair ATPase (MutS family).
 
   
 0.728
mutL
COG0323 DNA mismatch repair enzyme (predicted ATPase).
 
   
 0.692
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.