STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09443Thiamine pyrophosphate protein central region; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]. (542 aa)    
Predicted Functional Partners:
ilvH
COG0440 Acetolactate synthase, small (regulatory) subunit.
 0.997
C357_06589
COG0059 Ketol-acid reductoisomerase.
 
 
 0.964
C357_21725
COG1171 Threonine dehydratase.
 
 0.826
C357_17483
COG0473 Isocitrate/isopropylmalate dehydrogenase.
 0.820
C357_15116
COG1171 Threonine dehydratase.
 
 0.817
C357_13637
COG0281 Malic enzyme.
  
 
 0.808
C357_15081
COG0281 Malic enzyme.
  
 
 0.808
C357_11799
COG0753 Catalase.
   
 0.741
leuD
COG0066 3-isopropylmalate dehydratase small subunit.
 
 
 0.738
C357_08556
Putative alpha-isopropylmalate/homocitrate synthase family transferase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
 
 0.736
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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