STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09617FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). (351 aa)    
Predicted Functional Partners:
C357_02119
Sarcosine oxidase alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.972
C357_05763
Sarcosine oxidase alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.972
C357_15781
Sarcosine oxidase alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.972
C357_16016
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
    
 0.799
C357_05768
COG4583 Sarcosine oxidase gamma subunit.
 
  0.718
C357_05758
Sarcosine oxidase, delta subunit, heterotetrameric; COG4311 Sarcosine oxidase delta subunit.
  
  0.711
C357_02114
COG4583 Sarcosine oxidase gamma subunit.
  
  0.692
C357_15776
COG4583 Sarcosine oxidase gamma subunit.
  
  0.692
C357_02124
COG4311 Sarcosine oxidase delta subunit.
  
 0.687
C357_15786
COG4311 Sarcosine oxidase delta subunit.
  
 0.687
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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