STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_09727Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (284 aa)    
Predicted Functional Partners:
C357_15881
COG2124 Cytochrome P450.
   
 0.862
C357_08241
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
 0.849
C357_10714
COG2030 Acyl dehydratase.
 
  0.840
C357_01204
Metallophosphoesterase; COG0420 DNA repair exonuclease.
    
  0.747
C357_01520
COG2365 Protein tyrosine/serine phosphatase.
    
  0.728
C357_05014
COG1290 Cytochrome b subunit of the bc complex.
    
  0.723
C357_09702
ABC transporter-like protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
   
  0.723
C357_06404
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
    
  0.720
C357_16016
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
     
 0.710
C357_00734
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
   
  0.699
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.