STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_10819TRAP transporter, 4TM/12TM fusion protein; COG4666 TRAP-type uncharacterized transport system, fused permease components. (655 aa)    
Predicted Functional Partners:
C357_10824
TRAP dicarboxylate family transporter DctP subunit; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
  
  0.988
C357_10794
Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
  
  0.955
C357_10784
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
  0.942
C357_10789
TrapT family protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
  
  0.930
C357_10814
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.848
C357_10804
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.807
C357_10809
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
  0.801
C357_10557
TRAP transporter solute receptor TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
     0.780
C357_10884
TRAP transporter solute receptor; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
  
     0.775
C357_20942
TRAP transporter solute receptor TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
  
     0.774
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.