STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_11539Aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis. (397 aa)    
Predicted Functional Partners:
C357_08276
Gfo/Idh/MocA family oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
 
 0.960
C357_06694
Polysaccharide biosynthesis protein CapD; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 0.937
C357_08251
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
  
 0.923
C357_10097
COG1088 dTDP-D-glucose 4,6-dehydratase.
  
 
 0.898
C357_15881
COG2124 Cytochrome P450.
  
 
 0.763
C357_10507
GDP-mannose 4,6-dehydratase; COG1089 GDP-D-mannose dehydratase.
    
 0.739
C357_15266
Nucleotidyltransferase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
  
 0.730
C357_08296
Oxidoreductase domain protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
 0.697
C357_19141
Conserved hypothetical 43.9 kDa oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
 0.697
C357_15751
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.633
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.