STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_11594Helicase-like protein; COG0513 Superfamily II DNA and RNA helicases. (994 aa)    
Predicted Functional Partners:
C357_11584
S4 domain-containing protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).
       0.837
C357_11599
TPR domain-containing protein; COG0457 FOG: TPR repeat.
       0.749
C357_11579
Iron-sulfur cluster-binding protein; COG1146 Ferredoxin.
       0.727
C357_11604
Sterol-binding domain protein; COG3255 Putative sterol carrier protein.
       0.646
C357_11609
Alpha/beta hydrolase fold protein; COG2267 Lysophospholipase.
       0.641
C357_16026
Hypothetical protein.
  
     0.617
C357_03705
Aerobic cobaltochelatase CobT subunit; COG4547 Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase).
  
     0.527
C357_15641
COG0711 F0F1-type ATP synthase, subunit b.
  
     0.494
C357_12926
Hypothetical protein.
  
     0.492
C357_02876
Smr protein/MutS2; COG2840 Uncharacterized protein conserved in bacteria.
  
     0.490
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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