STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_11624Oligoendopeptidase, pepF/M3 family; COG1164 Oligoendopeptidase F. (612 aa)    
Predicted Functional Partners:
C357_11609
Alpha/beta hydrolase fold protein; COG2267 Lysophospholipase.
  
   0.706
C357_11619
COG1793 ATP-dependent DNA ligase.
       0.644
C357_11614
Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
  
    0.642
C357_11604
Sterol-binding domain protein; COG3255 Putative sterol carrier protein.
       0.632
C357_05693
Hypothetical protein; COG2021 Homoserine acetyltransferase.
   
    0.518
C357_04817
COG0015 Adenylosuccinate lyase.
  
    0.498
C357_00524
COG0117 Pyrimidine deaminase.
   
    0.495
C357_05852
COG0796 Glutamate racemase.
     
 0.486
C357_05877
COG2317 Zn-dependent carboxypeptidase.
 
    0.472
C357_11629
Hypothetical protein.
       0.461
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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