STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_12254COG0779 Uncharacterized protein conserved in bacteria. (232 aa)    
Predicted Functional Partners:
rpsL
COG0048 Ribosomal protein S12.
   
   0.991
nusA
COG0195 Transcription elongation factor.
 
  
 0.990
C357_12244
Hypothetical protein; COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination.
 
  
 0.987
rpsJ
COG0051 Ribosomal protein S10.
   
 
 0.972
C357_12239
Hypothetical protein.
  
  
 0.959
rpsF
COG0360 Ribosomal protein S6.
  
 
 0.938
ksgA
COG0030 Dimethyladenosine transferase (rRNA methylation).
    
 
 0.934
rpsB
COG0052 Ribosomal protein S2.
  
   0.934
C357_12839
COG0049 Ribosomal protein S7.
   
 
 0.934
rpsP
COG0228 Ribosomal protein S16.
   
   0.933
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.