STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_12379General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG. (175 aa)    
Predicted Functional Partners:
C357_12399
General secretion pathway protein K; COG3156 Type II secretory pathway, component PulK.
 
 
 0.997
C357_12394
Hypothetical protein; COG4795 Type II secretory pathway, component PulJ.
  
 0.992
C357_05239
Type II secretion system protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
 
 0.990
C357_17630
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
 
  
 0.964
C357_12374
Type IV prepilin leader peptidase family protein; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
  
 0.963
C357_12384
Hypothetical protein.
  
 
 0.957
C357_05234
General secretion pathway protein D; COG1450 Type II secretory pathway, component PulD.
 
  
 0.906
C357_05244
Hypothetical protein; COG1459 Type II secretory pathway, component PulF.
  
  
 0.854
C357_12389
Hypothetical protein.
    
 0.848
C357_12409
Hypothetical protein.
  
  
 0.769
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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