STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_12424Phage integrase family protein. (117 aa)    
Predicted Functional Partners:
ruvB
COG2255 Holliday junction resolvasome, helicase subunit.
     
 0.700
ruvA
COG0632 Holliday junction resolvasome, DNA-binding subunit.
     
 0.692
C357_11079
COG0556 Helicase subunit of the DNA excision repair complex.
     
 0.686
ruvC
COG0817 Holliday junction resolvasome, endonuclease subunit.
     
 0.672
uvrA
COG0178 Excinuclease ATPase subunit.
   
 
  0.628
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
   
 
  0.574
C357_00160
COG0582 Integrase.
   
 0.570
C357_01253
Phage integrase; COG4974 Site-specific recombinase XerD.
   
 0.570
C357_04422
COG4974 Site-specific recombinase XerD.
   
 0.570
xerC
Site-specific tyrosine recombinase XerC; COG0582 Integrase.
   
 0.570
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.