STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uvrACOG0178 Excinuclease ATPase subunit. (962 aa)    
Predicted Functional Partners:
C357_11079
COG0556 Helicase subunit of the DNA excision repair complex.
 
 0.999
C357_12744
COG1197 Transcription-repair coupling factor (superfamily II helicase).
 
 
 0.998
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
 
 0.995
mutL
COG0323 DNA mismatch repair enzyme (predicted ATPase).
 
  
 0.958
ruvB
COG2255 Holliday junction resolvasome, helicase subunit.
 
 
 0.951
ruvA
COG0632 Holliday junction resolvasome, DNA-binding subunit.
 
  
 0.925
ruvC
COG0817 Holliday junction resolvasome, endonuclease subunit.
  
 
 0.912
C357_03325
COG1846 Transcriptional regulators.
    
  0.882
C357_00199
Hypothetical protein.
    
 0.879
recA
COG0468 RecA/RadA recombinase.
 
  
 0.835
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.