STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_13927Putative nicotinamidase-like amidohydrolase; COG1335 Amidases related to nicotinamidase. (222 aa)    
Predicted Functional Partners:
C357_13932
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  0.888
C357_13937
Hypothetical protein; COG2334 Putative homoserine kinase type II (protein kinase fold).
 
    0.745
C357_08251
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
  
 
 0.709
C357_18976
YcdH; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.684
C357_13942
Pyridoxal phosphate aminotransferase; COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
 
    0.683
C357_01084
Asp/Glu racemase; COG3473 Maleate cis-trans isomerase.
 
  
 0.669
C357_19246
Aldehyde oxidoreductase, putative; COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
  
 0.667
C357_20065
COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
  
 
 0.616
C357_16586
COG1488 Nicotinic acid phosphoribosyltransferase.
  
 
 0.614
C357_18986
Endoribonuclease L-PSP family protein, putative; COG0251 Putative translation initiation inhibitor, yjgF family.
  
 
 0.614
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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