STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_13972COG1785 Alkaline phosphatase. (499 aa)    
Predicted Functional Partners:
C357_06659
COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
    
 
 0.934
C357_02896
COG1952 Preprotein translocase subunit SecB.
    
 
 0.924
tig
Trigger factor; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor).
    
 
 0.923
C357_13967
Hypothetical protein.
     0.919
C357_13957
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
     0.905
dnaK
COG0443 Molecular chaperone.
   
 
 0.880
C357_13962
Lipoprotein-releasing system ATP-binding protein LolD-1; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
     0.768
C357_21042
Molecular chaperone, DnaK; COG0443 Molecular chaperone.
   
 
 0.695
C357_17028
Phosphodiesterase-like protein; COG0584 Glycerophosphoryl diester phosphodiesterase.
  
 
 0.686
C357_20600
COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
   
  
 0.586
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.