STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_14147RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein. (485 aa)    
Predicted Functional Partners:
C357_14152
AcrB/AcrD/AcrF family transporter; COG0841 Cation/multidrug efflux pump.
 
  
 0.982
C357_01480
COG1538 Outer membrane protein.
  
 0.959
C357_12991
RND efflux system outer membrane lipoprotein; COG1538 Outer membrane protein.
  
 0.928
C357_07266
Putative efflux protein.
  
 0.816
C357_14002
Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump.
 
  
 0.805
C357_09797
EmrB/QacA family drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
  
 0.746
C357_11559
Putative transport protein transmembrane; COG0477 Permeases of the major facilitator superfamily.
  
 0.746
C357_14142
Molybdenum cofactor biosynthesis protein B; COG0521 Molybdopterin biosynthesis enzymes.
       0.710
C357_14132
COG1573 Uracil-DNA glycosylase.
       0.707
C357_12981
Acriflavin resistance protein B; COG0841 Cation/multidrug efflux pump.
    
 0.690
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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