STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_15151LysE-family transporter; COG1280 Putative threonine efflux protein. (192 aa)    
Predicted Functional Partners:
C357_15136
Chaperonin, 33 kDa; COG1281 Disulfide bond chaperones of the HSP33 family.
 
     0.806
C357_15146
polyA polymerase family protein; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase.
     
 0.777
C357_15141
Hydrolase, putative; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.774
C357_15156
ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.636
C357_15161
ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.636
C357_15131
NUDIX family hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.572
C357_15166
23S rRNA (Uracil-5-)-methyltransferase rumA; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase.
       0.534
C357_20095
N-acetyltransferase; GCN5-related; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.424
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.