STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_15241COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit. (187 aa)    
Predicted Functional Partners:
hslU
COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit.
 0.999
clpX
COG1219 ATP-dependent protease Clp, ATPase subunit.
 
 
 0.936
C357_15071
GrpE protein; COG0576 Molecular chaperone GrpE (heat shock protein).
   
  
 0.919
groEL
COG0459 Chaperonin GroEL (HSP60 family).
   
 
 0.915
C357_09289
COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
   
  
 0.910
groES
COG0234 Co-chaperonin GroES (HSP10).
   
  
 0.899
C357_21555
COG3118 Thioredoxin domain-containing protein.
  
  
 0.884
dnaK
COG0443 Molecular chaperone.
  
  
 0.857
C357_00010
Peptidase U35, phage prohead HK97; COG3740 Phage head maturation protease.
  
 0.850
clpP
COG0740 Protease subunit of ATP-dependent Clp proteases.
  
 0.850
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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