STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_15271COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases. (320 aa)    
Predicted Functional Partners:
C357_15266
Nucleotidyltransferase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
 0.999
C357_15276
COG0802 Predicted ATPase or kinase.
      0.985
C357_04277
Beta-hexosaminidase, putative; COG1472 Beta-glucosidase-related glycosidases.
 
  
 0.958
C357_15261
Hypothetical protein; COG3893 Inactivated superfamily I helicase.
    
  0.909
glmU
COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains).
    
 0.908
C357_15256
UvrD/REP helicase; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
       0.817
C357_02631
HAD family hydrolase; COG0546 Predicted phosphatases.
 
  
 0.768
C357_10467
COG0836 Mannose-1-phosphate guanylyltransferase.
    
  0.759
C357_15281
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
       0.757
C357_15251
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.739
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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