STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_15436COG1773 Rubredoxin. (268 aa)    
Predicted Functional Partners:
C357_15426
Hydrogenase-1 expression HyaE.
 
  
 0.982
C357_15431
HupH hydrogenase expression protein.
 
  
 0.981
C357_15441
Hydrogenase expression/formation protein HupK.
 
  
 0.979
C357_15416
Hydrogenase expression/formation protein; COG0680 Ni,Fe-hydrogenase maturation factor.
 
  
 0.971
C357_15421
COG0298 Hydrogenase maturation factor.
 
  
 0.971
C357_15446
COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression).
 
  
 0.948
C357_15456
Hydrogenase transcriptional regulator HupR; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
     0.943
C357_15381
NADH ubiquinone oxidoreductase, 20 kDa subunit; COG1740 Ni,Fe-hydrogenase I small subunit.
 
 
 0.937
C357_15461
Hypothetical protein; COG0298 Hydrogenase maturation factor.
 
  
 0.927
C357_15396
COG1740 Ni,Fe-hydrogenase I small subunit.
 
 
 0.915
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.