STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_15821COG1960 Acyl-CoA dehydrogenases. (562 aa)    
Predicted Functional Partners:
C357_03610
Fatty acid oxidation complex alpha subunit, putative; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.938
C357_21990
Hypothetical protein; COG2030 Acyl dehydratase.
  
  0.838
C357_10207
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
  
 0.832
C357_10202
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
  0.793
C357_18412
AMP-dependent synthetase and ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
  
  0.622
C357_21480
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.610
C357_02029
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
  0.596
C357_02304
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 
  0.596
C357_11244
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
  0.596
C357_18332
AMP-binding domain protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
  0.596
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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