STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16171Oligopeptide/dipeptide ABC transporter, ATPase subunit; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component. (312 aa)    
Predicted Functional Partners:
C357_16176
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.999
C357_16186
Extracellular solute-binding protein family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
  0.995
C357_11714
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.991
C357_08426
Opine ABC transporter, permease protein, putative; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.990
C357_13477
ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.989
C357_08795
Binding-protein dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.988
C357_20630
Peptide/opine/nickel uptake ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.988
C357_22235
Peptide/opine/nickel uptake ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.988
C357_16181
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.981
C357_07831
ABC transporter, permease protein, putative; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.980
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.