STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16421Transposase IS4 family protein; COG3293 Transposase and inactivated derivatives. (142 aa)    
Predicted Functional Partners:
C357_16416
COG3293 Transposase and inactivated derivatives.
     0.927
C357_03141
ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives.
     0.910
C357_10417
COG3293 Transposase and inactivated derivatives.
     0.792
C357_13365
ISBm1, transposase orfA; COG3293 Transposase and inactivated derivatives.
 
     0.701
C357_08161
COG3293 Transposase and inactivated derivatives.
  
     0.505
C357_16426
TatD family hydrolase; COG0084 Mg-dependent DNase.
       0.497
C357_16431
Hypothetical protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.456
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.