STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16431Hypothetical protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I. (266 aa)    
Predicted Functional Partners:
C357_20550
Phosphonate metabolism PhnJ; COG3627 Uncharacterized enzyme of phosphonate metabolism.
  
 
 0.930
C357_01293
Lipoyltransferase; COG0321 Lipoate-protein ligase B.
 
    
 0.920
C357_16426
TatD family hydrolase; COG0084 Mg-dependent DNase.
     
 0.814
C357_16436
Auxin efflux carrier family protein; COG0679 Predicted permeases.
       0.723
C357_10057
Riboflavin biosynthesis protein RibF; COG0196 FAD synthase.
      0.609
C357_10657
COG0320 Lipoate synthase.
    
 0.568
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.553
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.478
C357_16441
COG0104 Adenylosuccinate synthase.
     
 0.475
C357_13442
ABC phosphonate transporter ATP-binding protein; COG4778 ABC-type phosphonate transport system, ATPase component.
  
  
 0.473
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.