STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16486IS66 family insertion sequence transposase protein; COG3436 Transposase and inactivated derivatives. (230 aa)    
Predicted Functional Partners:
C357_15906
COG3436 Transposase and inactivated derivatives.
 
     0.976
C357_01278
Hypothetical protein; COG3436 Transposase and inactivated derivatives.
 
   
 0.785
C357_16481
IS66 Orf2 family protein; COG3436 Transposase and inactivated derivatives.
      
0.773
C357_13482
Xylose isomerase-like TIM barrel; COG1082 Sugar phosphate isomerases/epimerases.
  
     0.595
C357_13487
Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily.
  
     0.500
C357_13457
Oligopeptide ABC transpoter oligopeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
     0.418
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.