STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16601Rhodanese-like domain-containing protein; COG1054 Predicted sulfurtransferase. (314 aa)    
Predicted Functional Partners:
C357_13088
Hypothetical protein; COG0625 Glutathione S-transferase.
     0.940
C357_16596
Nicotinamidase; COG1335 Amidases related to nicotinamidase.
       0.725
C357_13587
Ribosomal large subunit pseudouridine synthase A; COG0564 Pseudouridylate synthases, 23S RNA-specific.
      0.706
C357_16586
COG1488 Nicotinic acid phosphoribosyltransferase.
       0.631
C357_13255
YjeF family protein.
  
    0.438
metH
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
       0.428
C357_16591
Sensory box sensor histidine kinase/response regulator; COG5002 Signal transduction histidine kinase.
       0.425
C357_18846
Ribosomal large subunit pseudouridine synthase C; COG0564 Pseudouridylate synthases, 23S RNA-specific.
      0.417
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.