STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_16863COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization. (278 aa)    
Predicted Functional Partners:
C357_16868
COG3194 Ureidoglycolate hydrolase.
 
  
  0.995
C357_16858
COG0726 Predicted xylanase/chitin deacetylase.
 
     0.911
C357_17113
Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
 
 0.805
C357_08700
Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
 
 
 0.803
C357_16853
COG2351 Transthyretin-like protein.
 
   
 0.798
C357_16873
COG2233 Xanthine/uracil permeases.
 
     0.709
C357_12304
COG2055 Malate/L-lactate dehydrogenases.
 
  
 0.667
C357_12149
Class I monoheme cytochrome c; COG3748 Predicted membrane protein.
 
     0.589
C357_06574
Aminotransferase family protein; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
 
  
  0.546
C357_01525
Serine--glyoxylate transaminase; COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
 
  
  0.528
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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