STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_17313Hypothetical protein; COG0762 Predicted integral membrane protein. (93 aa)    
Predicted Functional Partners:
C357_17308
Hypothetical protein.
 
     0.745
C357_17318
COG0514 Superfamily II DNA helicase.
       0.711
gatB
COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog).
  
    0.693
C357_10052
Hypothetical protein; COG0325 Predicted enzyme with a TIM-barrel fold.
  
  
 0.689
mepA
COG3770 Murein endopeptidase.
       0.619
C357_17303
COG2270 Permeases of the major facilitator superfamily.
       0.617
C357_14741
Hypothetical protein.
  
     0.614
C357_17323
COG3022 Uncharacterized protein conserved in bacteria.
       0.610
C357_16461
COG2917 Intracellular septation protein A.
  
     0.606
C357_17293
Hypothetical protein.
       0.582
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.