STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_17493Ectoine utilization protein EutD; COG0006 Xaa-Pro aminopeptidase. (398 aa)    
Predicted Functional Partners:
C357_06142
COG0516 IMP dehydrogenase/GMP reductase.
   
   0.865
ectC
L-ectoine synthase.
 
  
 0.700
C357_02119
Sarcosine oxidase alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
 0.695
C357_09463
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase.
  
     0.689
C357_02114
COG4583 Sarcosine oxidase gamma subunit.
  
  
  0.680
C357_05763
Sarcosine oxidase alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.652
C357_15781
Sarcosine oxidase alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 0.652
C357_05718
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 0.618
C357_15736
Putative sarcosine dehydrogenase protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 0.618
C357_04817
COG0015 Adenylosuccinate lyase.
    
  0.536
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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