STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_17900Hypothetical protein; COG1066 Predicted ATP-dependent serine protease. (324 aa)    
Predicted Functional Partners:
recA
COG0468 RecA/RadA recombinase.
   
  
 0.839
C357_17895
Hypothetical protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
       0.786
C357_17880
Phage integrase family site specific recombinase; COG0582 Integrase.
 
     0.617
C357_09573
COG0210 Superfamily I DNA and RNA helicases.
   
  
 0.594
C357_21232
COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
  
  
 0.585
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.575
C357_17890
Hypothetical protein; COG3311 Predicted transcriptional regulator.
       0.552
uvrC
COG0322 Nuclease subunit of the excinuclease complex.
   
  
 0.493
C357_18207
DEAD-box ATP dependent DNA helicase; COG1201 Lhr-like helicases.
   
    0.491
C357_16761
ADA regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
     
 0.442
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.