STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_17970Putative ABC transporter, ATP-binding component; COG4674 Uncharacterized ABC-type transport system, ATPase component. (246 aa)    
Predicted Functional Partners:
C357_17975
COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
 0.984
C357_17965
ABC transporter-like protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
 
0.953
C357_17820
Urea ABC transporter, permease protein UrtC; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
 0.952
C357_03415
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
 0.940
C357_17980
COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
 0.939
C357_10247
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; overlaps another CDS with the same product name.
 
 0.932
C357_19286
COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
 
 0.929
C357_17720
COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
 0.927
C357_08615
Urea or short-chain amide ABC transporter; COG4177 ABC-type branched-chain amino acid transport system, permease component.
 
 0.913
C357_17985
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
  
 0.908
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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