STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_18142Cytoplasmic chaperone TorD; COG3381 Uncharacterized component of anaerobic dehydrogenases. (399 aa)    
Predicted Functional Partners:
C357_18137
Hypothetical protein.
 
    0.967
C357_18147
Hypothetical protein.
 
   
 0.942
C357_18132
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.
 
  
 0.919
C357_18162
COG2864 Cytochrome b subunit of formate dehydrogenase.
 
  
 0.889
C357_18152
Formate dehydrogenase alpha subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
   
 0.887
C357_18157
4Fe-4S ferredoxin, iron-sulfur binding protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
  
 0.866
C357_18112
Hypothetical protein.
 
     0.860
C357_18117
Hypothetical protein; COG0340 Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.853
C357_18127
Hypothetical protein.
 
     0.839
C357_11954
COG1526 Uncharacterized protein required for formate dehydrogenase activity.
 
   
 0.731
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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