close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnhACOG0328 Ribonuclease HI. (153 aa)    
Predicted Functional Partners:
C357_09154
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.960
C357_03176
COG0629 Single-stranded DNA-binding protein.
 
 
 
 0.945
rnhB
COG0164 Ribonuclease HII.
   
 
 0.939
C357_15001
COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
 
 
 0.938
C357_19471
COG2860 Predicted membrane protein.
       0.837
C357_19011
COG2812 DNA polymerase III, gamma/tau subunits.
  
 0.773
C357_09134
N-acetyltransferase; GCN5-related; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
      0.697
flgC
COG1558 Flagellar basal body rod protein.
    
   0.694
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 
 
 0.684
C357_19481
Hypothetical protein.
       0.674
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.