STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_19768Putative periplasmic protein precursor; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (333 aa)    
Predicted Functional Partners:
C357_19778
Putative membrane protein (TRAP-type C4-dicarboxylate transport system); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
  0.994
C357_19773
Putative integral membrane protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
  0.926
C357_22830
Tripartite ATP-independent periplasmic transporter DctQ component; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.810
C357_22825
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.793
C357_08016
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.788
C357_11219
TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.788
C357_10959
Hypothetical protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.785
C357_01069
TRAP dicarboxylate transporter- DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.776
C357_17198
TRAP-domain-containing protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.774
C357_10789
TrapT family protein; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.770
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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