Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C357_20005Extracellular solute-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein. (342 aa)    
Predicted Functional Partners:
C357_20015
ABC transporter, membrane spanning protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.982
C357_20010
Putative transmembrane component of ABC transporter; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
  0.973
C357_20020
ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine); COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 0.958
C357_20030
COG1001 Adenine deaminase.
 
     0.906
C357_20000
LacI family transcriptional regulator; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.886
C357_20025
COG1957 Inosine-uridine nucleoside N-ribohydrolase.
 
     0.884
C357_21790
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.828
C357_02204
ABC spermidine/putrescine transporter, inner membrane subunit; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.782
C357_19995
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.773
C357_20040
COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins.
 
     0.751
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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