STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_20285COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase. (291 aa)    
Predicted Functional Partners:
C357_20330
COG0289 Dihydrodipicolinate reductase.
 
 0.994
C357_06699
COG0136 Aspartate-semialdehyde dehydrogenase.
 
 
 0.978
C357_03315
COG0019 Diaminopimelate decarboxylase.
  
 0.895
C357_09339
COG0460 Homoserine dehydrogenase.
 
 
 0.876
C357_13812
COG0527 Aspartokinases.
 
 
 0.812
C357_18247
COG0253 Diaminopimelate epimerase.
 
 
 0.795
gatC
COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit.
  
  
 0.759
C357_06384
COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily.
 
  
 0.712
C357_05857
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
    
 0.640
C357_12851
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase.
  
 
 0.635
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.