STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_20455Hypothetical protein; COG0319 Predicted metal-dependent hydrolase. (161 aa)    
Predicted Functional Partners:
C357_20470
PhoH-like protein; COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase.
 
  
 0.991
rpsQ
COG0186 Ribosomal protein S17.
    
 0.977
C357_02109
COG0605 Superoxide dismutase.
   
 
 0.969
C357_12144
Putative sulfurtransferase; Rhodanese-related; COG0607 Rhodanese-related sulfurtransferase.
 
 
  0.969
C357_14324
Hypothetical protein.
   
  0.965
truA
COG0101 Pseudouridylate synthase.
  
  0.962
C357_13410
50S ribosomal protein L21/unknown domain fusion protein; COG0261 Ribosomal protein L21.
 
 
 0.956
rplQ
COG0203 Ribosomal protein L17.
   
 
 0.953
rplK
COG0080 Ribosomal protein L11.
    
 
 0.946
rplM
COG0102 Ribosomal protein L13.
  
 
 0.933
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.