STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_20500FUR family transcriptional regulator; COG0735 Fe2+/Zn2+ uptake regulation proteins. (139 aa)    
Predicted Functional Partners:
C357_16016
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
    
 0.912
C357_18876
COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
   
   0.862
C357_11544
Polyhydroxyalkonate synthesis repressor, PhaR; COG5394 Uncharacterized protein conserved in bacteria.
      
 0.706
C357_13862
Phasin, PhaP.
      
 0.706
C357_20505
COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.
  
    0.683
C357_12824
COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
   0.631
C357_20510
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
 
     0.616
C357_13597
Thiol-specific antioxidant protein; COG0450 Peroxiredoxin.
  
  
 0.597
C357_20495
Putative oxidoreductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.578
rpoB
COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.
   
   0.544
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.