STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_20837Tetratricopeptide; COG0457 FOG: TPR repeat. (808 aa)    
Predicted Functional Partners:
C357_16786
SARP family transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  
 0.912
C357_20832
COG1596 Periplasmic protein involved in polysaccharide export.
 
     0.890
C357_22940
Sulfotransferase.
 
  
 0.889
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.879
C357_22975
Sulfotransferase.
 
  
 0.877
C357_20822
Transmembrane exosortase.
 
     0.876
C357_11099
Hypothetical protein.
    
 0.853
C357_11599
TPR domain-containing protein; COG0457 FOG: TPR repeat.
    
 0.853
C357_05301
Hypothetical protein.
    
 0.848
C357_20842
COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
 
     0.812
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.