STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_20872Hypothetical protein; COG1035 Coenzyme F420-reducing hydrogenase, beta subunit. (422 aa)    
Predicted Functional Partners:
C357_18132
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.
  
 0.962
C357_20867
Polysaccharide pyruvyl transferase.
     0.956
C357_15386
COG0374 Ni,Fe-hydrogenase I large subunit.
  
 0.911
C357_15401
COG0374 Ni,Fe-hydrogenase I large subunit.
  
 0.911
C357_15441
Hydrogenase expression/formation protein HupK.
  
 0.911
C357_20862
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.905
C357_20887
Hypothetical protein.
 
     0.856
C357_20882
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.770
C357_20877
Hypothetical protein.
       0.768
C357_16016
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
  
 0.765
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.