STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_21182GTP-binding protein, HSR1-like; COG2262 GTPases. (417 aa)    
Predicted Functional Partners:
rplK
COG0080 Ribosomal protein L11.
    
 
 0.973
rpmF
COG0333 Ribosomal protein L32.
    
 
 0.968
rplC
COG0087 Ribosomal protein L3.
    
 
 0.968
rplD
COG0088 Ribosomal protein L4.
    
 
 0.967
rplM
COG0102 Ribosomal protein L13.
    
 
 0.966
rplS
COG0335 Ribosomal protein L19.
   
   0.966
rplT
COG0292 Ribosomal protein L20.
    
   0.964
C357_13410
50S ribosomal protein L21/unknown domain fusion protein; COG0261 Ribosomal protein L21.
   
   0.964
rpmG
COG0267 Ribosomal protein L33.
    
   0.964
rplQ
COG0203 Ribosomal protein L17.
    
   0.964
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.