STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_21580Hypothetical protein. (224 aa)    
Predicted Functional Partners:
C357_21585
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
 
 
 0.964
C357_07841
RNA polymerase sigma-70 factor protein, ECF family; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
 
 
 0.854
C357_06062
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
 
 
 
 0.847
C357_21610
Hypothetical protein.
 
     0.588
C357_21590
Amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
     
 0.564
C357_21595
Hypothetical protein.
       0.563
C357_21600
COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
       0.536
C357_21605
Oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.530
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.