STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_21815Lytic transglycosylase, catalytic; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (161 aa)    
Predicted Functional Partners:
C357_21810
Hypothetical protein.
       0.556
C357_04342
Hypothetical protein.
  
     0.540
C357_21820
NAD-dependent epimerase/dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases.
       0.527
C357_05613
COG1539 Dihydroneopterin aldolase.
  
     0.512
C357_20667
Hypothetical protein; COG2215 ABC-type uncharacterized transport system, permease component.
  
     0.478
C357_01800
Hypothetical protein.
  
     0.461
C357_03785
ATP synthase FliI/YscN; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.458
C357_21560
COG3568 Metal-dependent hydrolase.
  
     0.455
fliE
COG1677 Flagellar hook-basal body protein.
  
  
 0.453
C357_13270
Hypothetical protein; COG2951 Membrane-bound lytic murein transglycosylase B.
  
   
 0.439
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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