STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_22050TPR domain-containing protein; COG0457 FOG: TPR repeat. (187 aa)    
Predicted Functional Partners:
C357_22060
Type II secretion system protein, putative; COG4965 Flp pilus assembly protein TadB.
 
  
 0.944
C357_22070
ATPase, putative; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.942
C357_22040
Hypothetical protein.
 
   
 0.940
C357_22045
Tetratricopeptide region.
 
     0.938
C357_16386
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
 
 0.927
C357_22055
TadC family type II/IV secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
  
 0.925
C357_22080
Type II and III secretion system protein; COG4964 Flp pilus assembly protein, secretin CpaC.
 
  
 0.867
C357_22085
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.827
C357_22075
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
     0.824
C357_22065
Type II/IV secretion system protein; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.809
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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