STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_22740NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. (147 aa)    
Predicted Functional Partners:
C357_13255
YjeF family protein.
  
 0.980
C357_22745
COG0306 Phosphate/sulphate permeases.
 
  
 0.846
C357_03290
COG0557 Exoribonuclease R.
   
 0.834
C357_18662
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
    
  0.830
C357_22720
ATP-dependent helicase HrpB; COG1643 HrpA-like helicases.
    
  0.794
C357_15851
Ribonuclease III; COG0571 dsRNA-specific ribonuclease.
    
 0.792
C357_06284
COG0513 Superfamily II DNA and RNA helicases.
    
 0.776
C357_11694
DEAD/DEAH box helicase-like protein; COG0513 Superfamily II DNA and RNA helicases.
    
 0.776
C357_11944
DEAD-box ATP dependent DNA helicase; COG0513 Superfamily II DNA and RNA helicases.
    
 0.776
rph
COG0689 RNase PH.
    
 0.770
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.