STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C357_22825TRAP dicarboxylate transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (427 aa)    
Predicted Functional Partners:
C357_22835
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  0.997
C357_22830
Tripartite ATP-independent periplasmic transporter DctQ component; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.996
C357_11229
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.969
C357_08011
Trap transporter solute receptor; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.797
C357_19768
Putative periplasmic protein precursor; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.793
C357_10949
TRAP dicarboxylate transporter- DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.788
C357_02556
TRAP transporter solute receptor DctP family protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.741
C357_22820
COG4569 Acetaldehyde dehydrogenase (acetylating).
    
  0.734
C357_22815
4-hydroxy-2-ketovalerate aldolase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
    
  0.701
C357_17188
Putative extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.689
Your Current Organism:
Citreicella sp. 357
NCBI taxonomy Id: 766499
Other names: C. sp. 357
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