STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XDD4_STRPUPHD-type domain-containing protein. (500 aa)    
Predicted Functional Partners:
W4Y726_STRPU
Uncharacterized protein.
    
 0.945
W4Y269_STRPU
ARID domain-containing protein.
   
 0.700
W4YZA2_STRPU
Tudor domain-containing protein.
   
 0.700
W4Z2G2_STRPU
Uncharacterized protein.
   
 
 0.614
W4Y1K9_STRPU
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
   
 
 0.561
W4YUZ7_STRPU
Uncharacterized protein; Belongs to the RecA family.
   
 
 0.561
W4Z120_STRPU
Uncharacterized protein; Belongs to the actin family.
    
 0.552
W4XXF3_STRPU
RuvB-like helicase; Belongs to the RuvB family.
    
 0.548
W4XJG9_STRPU
Uncharacterized protein.
   
 0.513
W4Y7F6_STRPU
Uncharacterized protein.
   
 0.513
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.