STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XDD8_STRPUIF-2 domain-containing protein. (441 aa)    
Predicted Functional Partners:
W4YD34_STRPU
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.945
W4XPE3_STRPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.942
W4ZJD8_STRPU
RING-type domain-containing protein.
   
   0.942
W4XK38_STRPU
Uncharacterized protein.
 
     0.931
W4YK88_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.924
W4Z3I3_STRPU
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.901
Rps14
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.900
W4XKH8_STRPU
Uncharacterized protein.
   
 
 0.892
H3HLD5_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.891
W4XZA7_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 0.890
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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